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CellProfiler

CellProfiler is free, open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.

CellProfiler exercises to help new users better understand how to use CellProfiler. We recommend downloading the software and following along the linked YouTube playlist by the CellProfiler team.

© 2026 by The Egypt (bio)Imaging Network

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